STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_17638Uncharacterized protein. (539 aa)    
Predicted Functional Partners:
BC332_26314
Geranylgeranyl transferase type-2 subunit beta.
    
 
 0.760
BC332_09339
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 
 0.760
BC332_34072
SKP1-like protein 14.
    
 0.754
BC332_33941
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.754
BC332_33938
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.754
BC332_33942
SKP1-like protein 4; Belongs to the SKP1 family.
    
 0.754
BC332_33940
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.754
BC332_33228
SKP1-like protein 1B; Belongs to the SKP1 family.
    
 0.754
BC332_29399
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.754
BC332_29865
SKP1-like protein 11; Belongs to the SKP1 family.
    
 0.754
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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