STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_13968Cellulose synthase-like protein D1; Belongs to the glycosyltransferase 2 family. (1135 aa)    
Predicted Functional Partners:
BC332_30324
Uncharacterized protein.
  
 
  0.511
BC332_25660
Uncharacterized protein.
  
 
  0.511
BC332_14927
LOB domain-containing protein 13.
  
 
  0.495
BC332_09878
Protein STRUBBELIG-RECEPTOR FAMILY 5.
  
 
  0.493
BC332_20597
BTB/POZ domain-containing protein POB1.
  
 
  0.488
BC332_25571
Uncharacterized protein.
  
     0.487
BC332_07819
Indole-3-acetate O-methyltransferase 1.
  
 
  0.487
BC332_13193
Putative LRR receptor-like serine/threonine-protein kinase RPK1.
  
 
  0.484
BC332_07280
Serine/threonine-protein phosphatase BSL3.
    
  0.483
BC332_07279
Serine/threonine-protein phosphatase.
    
  0.483
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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