STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_11092Cytochrome b561 and DOMON domain-containing protein. (381 aa)    
Predicted Functional Partners:
BC332_29476
Uncharacterized protein.
   
 
 0.735
BC332_09226
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.707
BC332_21241
Uncharacterized protein.
   
 
 0.692
BC332_22989
Uncharacterized protein.
   
 
 0.666
BC332_16224
50S ribosomal protein L34.
   
 
 0.635
BC332_18229
Prolamin_like domain-containing protein.
   
   0.633
BC332_07138
Uncharacterized protein.
   
   0.633
BC332_12492
L51_S25_CI-B8 domain-containing protein.
    
   0.618
BC332_29740
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.607
BC332_06703
50S ribosomal protein L28, chloroplastic.
   
 
 0.585
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
Server load: low (22%) [HD]