STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_11485Phosphoinositide phosphatase SAC1. (702 aa)    
Predicted Functional Partners:
BC332_12546
Phosphatidylinositol 3-kinase, root isoform; Belongs to the PI3/PI4-kinase family.
   
 
 0.950
BC332_29924
Phosphatidylinositol-3-phosphatase myotubularin-1.
     
 0.875
BC332_28324
Protein VAC14-like protein.
    
 0.714
BC332_28321
Uncharacterized protein.
    
 0.714
BC332_13136
Protein VAC14-like protein.
    
 0.714
BC332_01960
Vac14_Fig4_bd domain-containing protein.
    
 0.714
BC332_28323
Protein VAC14-like protein.
    
 0.708
BC332_27084
Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C.
    
 0.616
BC332_23687
Uncharacterized protein.
    
 0.616
BC332_20836
Uncharacterized protein.
    
 0.616
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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