STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_11468F-box protein. (320 aa)    
Predicted Functional Partners:
BC332_23437
Flavin-containing monooxygenase.
    
   0.618
BC332_14668
Flavin-containing monooxygenase.
    
   0.618
BC332_17507
Flavin-containing monooxygenase.
    
   0.618
BC332_06602
Flavin-containing monooxygenase.
    
   0.527
BC332_04060
Putative indole-3-pyruvate monooxygenase YUCCA7.
    
   0.527
BC332_02986
Uncharacterized protein; Belongs to the NPH3 family.
  
     0.512
BC332_21226
F-box domain-containing protein.
      
 0.493
BC332_08969
Uncharacterized protein.
  
     0.491
BC332_08042
Transcription factor PCF2.
  
     0.479
BC332_12737
C2 domain-containing protein.
  
     0.477
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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