STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_11693Serine/threonine-protein kinase CTR1. (899 aa)    
Predicted Functional Partners:
BC332_02687
GTP-binding protein SAR1A; Belongs to the small GTPase superfamily. SAR1 family.
    
  0.898
BC332_15280
Protein transport protein SEC31-like protein B.
    
  0.777
BC332_34656
Uncharacterized protein.
    
 0.587
BC332_24106
Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway.
    
 0.543
BC332_19715
Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway.
    
 0.543
BC332_07147
Ethylene receptor.
    
 0.543
BC332_28633
Cysteine and histidine-rich domain-containing protein RAR1.
      
 0.527
BC332_23035
Uncharacterized protein.
    
 
 0.514
BC332_30224
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
 
0.497
BC332_10933
Auxin transporter-like protein 3.
    
 0.491
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.