STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_06391Pectate lyase. (385 aa)    
Predicted Functional Partners:
BC332_29238
Pectinesterase.
   
 
 0.940
BC332_22483
Putative pectinesterase 11.
   
 
 0.940
BC332_19879
Pectinesterase QRT1.
   
 
 0.940
BC332_02479
Pectinesterase.
   
 
 0.940
BC332_08905
Uncharacterized protein.
     
 0.937
BC332_26638
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
     
 0.936
BC332_32130
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
    
  0.935
BC332_29961
Putative pectinesterase/pectinesterase inhibitor 44; In the C-terminal section; belongs to the pectinesterase family.
   
 
  0.934
BC332_25123
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
   
 
  0.934
BC332_21972
Pectinesterase; In the C-terminal section; belongs to the pectinesterase family.
   
 
  0.934
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.