STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_06592Nucleoside diphosphate kinase; Belongs to the NDK family. (110 aa)    
Predicted Functional Partners:
BC332_05447
Uncharacterized protein.
   
  0.951
BC332_32165
Nucleoside diphosphate kinase.
  
  
  0.919
BC332_24892
30S ribosomal protein S10, chloroplastic.
   
  0.916
BC332_21677
40S ribosomal protein S20.
   
  0.916
BC332_21685
40S ribosomal protein S20.
   
  0.916
BC332_18985
Thymidylate_kin domain-containing protein.
    
 0.914
rps7
30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.
  
  0.910
BC332_33494
Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family.
  
  0.910
BC332_26948
40S ribosomal protein S5-1; Belongs to the universal ribosomal protein uS7 family.
  
  0.910
BC332_29740
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
  0.907
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
Server load: low (20%) [HD]