STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_07188Uncharacterized protein. (349 aa)    
Predicted Functional Partners:
BC332_26064
Protein ELC.
  
  
 
0.960
BC332_26325
Vacuolar protein sorting-associated protein 28-like protein 2; Belongs to the VPS28 family.
   
 0.955
BC332_10348
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.955
BC332_04936
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.955
BC332_28184
Vacuolar protein-sorting-associated protein 37-like protein 1.
    
 0.944
BC332_25974
Vacuolar protein-sorting-associated protein 37-like protein 2.
    
 0.944
BC332_26400
Vacuolar protein-sorting-associated protein 37-like protein 2.
    
 0.944
BC332_15204
ANK_REP_REGION domain-containing protein.
    
 0.941
BC332_15205
FYVE-type domain-containing protein.
    
 0.941
BC332_04885
FYVE-type domain-containing protein.
    
 0.941
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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