STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_0791740S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (140 aa)    
Predicted Functional Partners:
BC332_26946
40S ribosomal protein S28.
   
 0.992
BC332_09117
40S ribosomal protein S19-2.
   
 0.992
BC332_16520
40S ribosomal protein S7.
   
 0.986
BC332_09699
40S ribosomal protein S7.
   
 0.986
BC332_05706
Ribosomal_TL5_C domain-containing protein.
  
 0.986
BC332_32703
60S ribosomal protein L30.
  
 
 0.985
BC332_24928
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.985
BC332_28071
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.984
BC332_26948
40S ribosomal protein S5-1; Belongs to the universal ribosomal protein uS7 family.
  
 0.984
BC332_16814
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.984
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.