STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_08523Protein argonaute 1A; Belongs to the argonaute family. (1112 aa)    
Predicted Functional Partners:
BC332_21612
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.718
BC332_08206
Uncharacterized protein.
   
 0.718
BC332_25748
Uncharacterized protein.
   
 0.622
BC332_13198
Uncharacterized protein.
    
 0.612
BC332_06363
Importin beta-like SAD2.
    
 0.583
BC332_25395
Endoribonuclease Dicer-like protein 1; Belongs to the helicase family. Dicer subfamily.
   
 0.527
BC332_27552
Protein RAE1.
     
 0.517
BC332_18145
Dicer-like protein 4; Belongs to the helicase family. Dicer subfamily.
   
 0.436
BC332_09210
DRBM domain-containing protein.
   
 0.436
BC332_29136
DNA-directed RNA polymerases II, IV and V subunit 11.
    
 0.430
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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