STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_03275Eukaryotic translation initiation factor 5A-5. (190 aa)    
Predicted Functional Partners:
BC332_20883
60S ribosomal protein L5.
   
 
 0.950
BC332_32703
60S ribosomal protein L30.
   
 
 0.931
BC332_32263
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.926
BC332_09117
40S ribosomal protein S19-2.
   
   0.917
BC332_32123
Putative 60S ribosomal protein L18-1.
  
 
 0.915
BC332_05706
Ribosomal_TL5_C domain-containing protein.
  
 
 0.911
BC332_26946
40S ribosomal protein S28.
   
   0.907
BC332_03607
60S ribosomal protein L13-1.
   
 
 0.902
BC332_00988
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 
 0.902
rps7
30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.
  
 
 0.893
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.