STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_0428860S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (178 aa)    
Predicted Functional Partners:
BC332_32703
60S ribosomal protein L30.
   
 0.990
BC332_32123
Putative 60S ribosomal protein L18-1.
   
 0.989
BC332_20883
60S ribosomal protein L5.
   
 0.989
BC332_26602
60S ribosomal protein L21-2.
  
 0.981
BC332_26839
60S ribosomal protein L21-2.
  
 0.981
BC332_26946
40S ribosomal protein S28.
   
 
 0.981
BC332_09117
40S ribosomal protein S19-2.
  
 
 0.981
BC332_17061
60S ribosomal protein L12-1; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.980
BC332_31370
60S ribosomal protein L13a-4; Belongs to the universal ribosomal protein uL13 family.
   
 0.977
BC332_06456
60S ribosomal protein L13a-4; Belongs to the universal ribosomal protein uL13 family.
   
 0.977
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.