STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_04326Nuclear pore complex protein. (1944 aa)    
Predicted Functional Partners:
BC332_09467
Nuclear pore complex protein NUP35.
    
 0.983
BC332_22045
DUF5311 domain-containing protein.
   
 0.980
BC332_02711
Uncharacterized protein.
   
 0.980
BC332_20067
C2H2-type domain-containing protein.
   
 0.972
BC332_28300
Uncharacterized protein.
   
 0.971
BC332_27981
Nuclear pore complex protein NUP88.
    
 0.964
BC332_11083
Nuclear pore complex protein NUP54.
    
 0.960
BC332_18338
Uncharacterized protein.
   
 0.956
BC332_03994
Nuclear pore complex protein.
   
 0.956
BC332_12416
Nuclear pore protein.
   
 0.953
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
Server load: low (10%) [HD]