STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_00248DUF295 domain-containing protein. (429 aa)    
Predicted Functional Partners:
BC332_31180
Uncharacterized protein.
    
 
 0.601
BC332_06472
High mobility group B protein 15.
    
 
 0.601
BC332_09716
Uncharacterized protein.
    
 
 0.601
BC332_02268
High mobility group B protein 9.
    
 
 0.601
BC332_13362
Uncharacterized protein.
  
 
 0.572
BC332_34656
Uncharacterized protein.
    
 0.555
BC332_18073
Uncharacterized protein.
  
 
  0.534
BC332_27432
F-box domain-containing protein.
  
     0.516
BC332_12619
Uncharacterized protein.
  
     0.513
BC332_27801
NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.
  
     0.506
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.