STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_00501Biotin--protein ligase 1, chloroplastic. (505 aa)    
Predicted Functional Partners:
BC332_16939
Biotin synthase.
  
 
 0.973
BC332_32135
Pantoate--beta-alanine ligase.
  
 
 0.930
BC332_23788
Pantoate--beta-alanine ligase.
  
 
 0.930
BC332_29874
Biotin--protein ligase 1, chloroplastic.
  
  
 
0.899
BC332_31820
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
 0.823
BC332_23593
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
    
 0.823
BC332_30712
Phosphopantothenate--cysteine ligase 2.
  
 
 0.807
BC332_11414
Phosphopantothenate--cysteine ligase 1.
  
 
 0.807
BC332_11412
Phosphopantothenate--cysteine ligase 2.
  
 
 0.807
BC332_00317
Phosphopantothenoylcysteine decarboxylase.
  
 
 0.807
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.