STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_00629Uncharacterized protein. (333 aa)    
Predicted Functional Partners:
BC332_21026
Elongation factor 2.
    
 0.802
BC332_21019
Elongation factor 2.
    
 0.802
BC332_14803
Elongation factor 2.
    
 0.802
BC332_14802
Elongation factor 2.
    
 0.802
BC332_14203
Kin17_mid domain-containing protein.
   
 0.736
BC332_09554
KIN17-like protein.
   
 0.736
BC332_10703
Methyltranfer_dom domain-containing protein.
   
  
 0.656
BC332_05491
Protein-lysine N-methyltransferase BC332_05491; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.
   
  
 0.656
BC332_09593
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
 
    
 0.651
BC332_00056
Uncharacterized protein.
   
  
 0.593
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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