STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_01302Uncharacterized protein. (554 aa)    
Predicted Functional Partners:
BC332_11817
RING-type E3 ubiquitin transferase.
  
   
 0.500
BC332_12240
RING-type E3 ubiquitin transferase.
  
   
 0.495
BC332_27643
Pentatricopeptide repeat-containing protein, mitochondrial.
      
 0.431
BC332_34697
Filament-like plant protein 6.
  
     0.428
BC332_34223
Filament-like plant protein 6.
  
     0.421
BC332_34428
Filament-like plant protein 6.
  
     0.420
BC332_01512
Uncharacterized protein.
      
 0.418
BC332_02642
Uncharacterized protein.
      
 0.418
BC332_34238
Filament-like plant protein 4.
  
     0.412
BC332_08704
Filament-like plant protein 6.
  
     0.412
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.