STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_02654GRAS domain-containing protein; Belongs to the GRAS family. (564 aa)    
Predicted Functional Partners:
BC332_33841
Anaphase-promoting complex subunit 11.
    
 0.740
BC332_31732
Uncharacterized protein.
    
 0.693
BC332_21669
E3 ubiquitin-protein ligase KEG.
    
 0.693
BC332_04685
Anaphase-promoting complex subunit 4.
    
 0.679
BC332_23944
Anaphase-promoting complex subunit 6.
    
 0.640
BC332_07774
RAN GTPase-activating protein 1.
   
 0.639
BC332_02709
RAN GTPase-activating protein 2.
   
 0.639
BC332_17573
E3 ubiquitin-protein ligase CHIP.
    
 0.629
BC332_17347
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.628
BC332_23151
E3 ubiquitin-protein ligase UPL4.
   
 0.626
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.