STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC332_02695BRCT domain-containing protein. (1217 aa)    
Predicted Functional Partners:
BC332_26734
Helicase ATP-binding domain-containing protein.
   
 0.987
BC332_25798
Uncharacterized protein; Belongs to the rad9 family.
    
 0.968
BC332_22576
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
    
 0.965
BC332_14509
BRCT domain-containing protein.
  
  
 
0.958
BC332_09450
Helicase ATP-binding domain-containing protein.
   
 0.932
BC332_18146
DNA helicase; Belongs to the MCM family.
   
 
 0.925
BC332_05043
Uncharacterized protein.
    
 0.886
BC332_14655
Uncharacterized protein.
  
 0.877
BC332_09303
Checkpoint protein; Belongs to the HUS1 family.
    
 0.854
BC332_20951
Uncharacterized protein.
  
0.835
Your Current Organism:
Capsicum chinense
NCBI taxonomy Id: 80379
Other names: C. chinense, Capsicum chinense Jacq., Scotch bonnet, bonnet pepper, habanero, piri piri, rocotillo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.