STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000000016annotation not available (57 aa)    
Predicted Functional Partners:
ENSGMOP00000011181
UBX domain protein 7.
    
   0.836
ENSGMOP00000002085
Mitochondrial ribosomal protein L33.
   
 
 0.688
ENSGMOP00000000531
Mitochondrial ribosomal protein L27.
   
 
 0.686
ENSGMOP00000018617
Mitochondrial ribosomal protein L47.
   
 
 0.685
ENSGMOP00000020010
Mitochondrial ribosomal protein L46.
   
 
 0.684
ENSGMOP00000014634
Mitochondrial ribosomal protein L22.
   
 
 0.683
ENSGMOP00000004771
Mitochondrial ribosomal protein L23.
   
 
 0.682
ENSGMOP00000010582
Mitochondrial ribosomal protein L43.
   
   0.682
ENSGMOP00000018285
Mitochondrial ribosomal protein L3.
   
 
 0.681
ENSGMOP00000021297
Mitochondrial ribosomal protein S6.
   
   0.669
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.