STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000000094Ring finger protein 130. (345 aa)    
Predicted Functional Partners:
ENSGMOP00000008109
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.810
ENSGMOP00000012733
Ribosomal protein S27a.
    
 0.766
ENSGMOP00000007083
Zinc finger, AN1-type domain 4.
   
 0.678
ENSGMOP00000004924
annotation not available
    
 0.642
ENSGMOP00000009483
Relaxin family peptide receptor 1.
    
 0.642
ENSGMOP00000014154
Relaxin family peptide receptor 2a.
    
 0.642
ENSGMOP00000020126
Danio rerio leucine-rich repeat containing G protein-coupled receptor 4 (lgr4), mRNA.
    
 0.642
ENSGMOP00000007861
Thyroid hormone receptor interactor 12.
   
 
 0.624
ENSGMOP00000006673
OTU deubiquitinase, ubiquitin aldehyde binding 1b.
   
 0.609
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
   
 0.609
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.