STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000000233Retinal degeneration 3, GUCY2D regulator. (207 aa)    
Predicted Functional Partners:
ENSGMOP00000019140
Eukaryotic translation initiation factor 2B, subunit 1 alpha.
    
   0.621
ENSGMOP00000010780
annotation not available
  
   
 0.617
ENSGMOP00000009785
annotation not available
      
 0.521
ENSGMOP00000000964
annotation not available
      
 0.506
ENSGMOP00000013202
SUN domain containing ossification factor.
      
 0.479
ENSGMOP00000018377
annotation not available
      
 0.479
ENSGMOP00000000241
NIMA-related kinase 2.
      
 0.472
ENSGMOP00000011071
Centrosomal protein 290.
      
 0.463
ENSGMOP00000006728
Lecithin retinol acyltransferase b, tandem duplicate 1.
      
 0.461
ENSGMOP00000002629
Aryl hydrocarbon receptor interacting protein-like 1.
      
 0.456
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.