STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000000237Solute carrier family 30 member 1a. (428 aa)    
Predicted Functional Partners:
SLC39A11
Solute carrier family 39 member 11.
   
 0.608
ENSGMOP00000004607
Solute carrier family 39 member 7.
  
 0.594
ENSGMOP00000013913
Solute carrier family 39 member 8.
  
 0.548
ENSGMOP00000020171
Solute carrier family 39 member 13.
   
 0.542
ENSGMOP00000006582
Solute carrier family 39 member 14.
  
 0.536
SLC39A12
Solute carrier family 39 member 12.
  
 0.534
ENSGMOP00000014222
Solute carrier family 30 member 6.
    
 
 0.514
ENSGMOP00000016140
Solute carrier family 30 member 4.
  
 
 
0.489
ENSGMOP00000005627
annotation not available
  
  
 0.481
ENSGMOP00000017533
ATPase copper transporting alpha.
  
  
 0.481
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.