STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000000259Calpain 2, (m/II) large subunit b. (688 aa)    
Predicted Functional Partners:
ENSGMOP00000007345
Talin 2b.
    
 0.855
ENSGMOP00000014174
Talin 1.
    
 0.855
ENSGMOP00000018406
Talin 2a.
    
 0.855
ENSGMOP00000019763
Calpain 2, (m/II) large subunit, like.
  
  
 
0.829
ENSGMOP00000005480
BCL2 associated X, apoptosis regulator a.
    
  0.827
ENSGMOP00000015924
annotation not available
   
  0.827
ENSGMOP00000009542
annotation not available
   
 0.820
CAPNS1
Calpain small subunit 1.
   
0.798
ENSGMOP00000012015
Calpain, small subunit 1 b.
   
0.798
ENSGMOP00000018253
Calpain 1, (mu/I) large subunit a.
  
  
 
0.645
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.