STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARS2alanyl-tRNA synthetase 2, mitochondrial. (939 aa)    
Predicted Functional Partners:
ENSGMOP00000021096
Cell division cycle 16 homolog (S. cerevisiae).
   
 0.958
ENSGMOP00000008292
Anaphase promoting complex subunit 4.
   
 0.956
ENSGMOP00000007600
Anaphase promoting complex subunit 10.
   
 0.955
ENSGMOP00000010291
Anaphase promoting complex subunit 1.
   
 0.955
ENSGMOP00000016278
Anaphase promoting complex subunit 2.
    
 0.954
anapc7
Anaphase promoting complex subunit 7.
   
 0.941
ENSGMOP00000014159
alanyl-tRNA synthetase domain containing 1.
   
 
0.938
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.936
ENSGMOP00000020984
annotation not available
  
 
 0.936
ENSGMOP00000006968
tyrosyl-tRNA synthetase 1.
  
 
 0.923
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.