STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btf3Basic transcription factor 3. (162 aa)    
Predicted Functional Partners:
ENSGMOP00000001246
Nascent polypeptide associated complex subunit alpha.
   
 
 0.977
ENSGMOP00000017248
annotation not available
   
 
 0.961
ENSGMOP00000012357
Ribosomal protein L6.
   
 
 0.959
ENSGMOP00000002317
Ribosomal protein L30.
   
   0.956
ENSGMOP00000019324
Ribosomal protein L32.
   
   0.953
rpl29
Ribosomal protein L29.
   
   0.952
ENSGMOP00000005867
Ribosomal protein L18.
   
   0.952
ENSGMOP00000003830
Ribosomal protein L24.
   
   0.951
RPL37A
Ribosomal protein L37a.
   
 
 0.951
rpl8
Ribosomal protein L8.
   
   0.951
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.