STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000000564Solute carrier family 10 member 1. (254 aa)    
Predicted Functional Partners:
ENSGMOP00000003966
Ornithine carbamoyltransferase.
   
  
 0.543
ENSGMOP00000016158
Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.
    
 0.502
ENSGMOP00000016785
Cytochrome P450, family 7, subfamily A, polypeptide 1.
  
  
 0.501
ENSGMOP00000012512
Serpin peptidase inhibitor, clade D (heparin cofactor), member 1.
   
    0.478
ENSGMOP00000001008
Nuclear receptor subfamily 0, group B, member 2a.
   
  
 0.457
ENSGMOP00000006159
Sorbitol dehydrogenase.
  
  
 0.451
ENSGMOP00000014126
Biogenesis of lysosomal organelles complex-1, subunit 1.
     
 0.429
ENSGMOP00000018470
Biogenesis of lysosomal organelles complex-1, subunit 3.
     
 0.422
ENSGMOP00000019576
annotation not available
  
  
 0.417
ENSGMOP00000015125
Pleckstrin homology domain containing, family D (with coiled-coil domains) member 1.
      
 0.412
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.