STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001020WD repeat domain 44. (860 aa)    
Predicted Functional Partners:
ENSGMOP00000002583
VRK serine/threonine kinase 2.
 
      0.631
ENSGMOP00000013573
C-type lectin domain containing 16A.
      
 0.583
ENSGMOP00000010523
Aquarius intron-binding spliceosomal factor.
      
 0.582
ENSGMOP00000003545
Pantothenate kinase 4 (inactive).
      
 0.527
CBS
Cystathionine beta-synthase.
      
 0.520
ENSGMOP00000001644
Eukaryotic translation initiation factor 4A3.
      
 0.518
ENSGMOP00000012281
KAT8 regulatory NSL complex subunit 2.
      
 0.447
ENSGMOP00000013246
VAMP (vesicle-associated membrane protein)-associated protein A, like.
   
 
 0.424
LOC115557502
Vesicle-associated membrane protein-associated protein B-like.
   
 
 0.424
ENSGMOP00000010302
annotation not available
      
 0.422
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.