STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001085annotation not available (480 aa)    
Predicted Functional Partners:
ENSGMOP00000017734
Cytochrome b5 reductase 4.
   
  0.840
ENSGMOP00000017732
annotation not available
  
 
 0.629
ENSGMOP00000004806
Thymidine kinase 1, soluble.
    
 0.600
ENSGMOP00000013142
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
  
 
 0.590
ENSGMOP00000005752
Thymidylate synthetase.
  
 
  0.587
ENSGMOP00000011101
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.571
ENSGMOP00000017144
Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic.
   
 0.571
ENSGMOP00000016552
annotation not available
   
 0.570
ENSGMOP00000008291
Tumor protein p53.
    
 0.546
ENSGMOP00000010713
NME/NM23 family member 8.
  
 0.509
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.