STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO6Myosin VI. (1221 aa)    
Predicted Functional Partners:
DAB2
DAB adaptor protein 2.
    
 0.944
ENSGMOP00000000050
Clathrin, light chain A.
    
  0.854
LOC115551879
Clathrin light chain B-like.
    
  0.854
ENSGMOP00000000957
GIPC PDZ domain containing family, member 3.
    
 
 0.821
ENSGMOP00000008760
GIPC PDZ domain containing family, member 1.
    
 
 0.821
ENSGMOP00000012733
Ribosomal protein S27a.
    
   0.821
gipc2
GIPC PDZ domain containing family member 2.
    
 
 0.821
ENSGMOP00000008109
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.809
ENSGMOP00000003321
annotation not available
    
  0.760
ENSGMOP00000013139
P21 protein (Cdc42/Rac)-activated kinase 1.
    
  0.760
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.