STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001176annotation not available (981 aa)    
Predicted Functional Partners:
ENSGMOP00000011181
UBX domain protein 7.
    
  0.660
ENSGMOP00000010359
annotation not available
    
 0.648
ENSGMOP00000000456
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.631
ttc8
Tetratricopeptide repeat domain 8.
    
  0.619
ENSGMOP00000013606
Bardet-Biedl syndrome 7.
    
 0.606
ENSGMOP00000002925
NBR1 autophagy cargo receptor a.
    
 0.572
ENSGMOP00000008978
NBR1 autophagy cargo receptor b.
    
 0.572
ENSGMOP00000006085
CDK2 associated cullin domain 1.
    
 0.511
ENSGMOP00000006374
annotation not available
    
 0.511
CUL3
Cullin-3-like.
    
 0.511
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.