STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001239Synaptic vesicle glycoprotein 2Bb. (648 aa)    
Predicted Functional Partners:
ENSGMOP00000005320
annotation not available
    
 0.842
ENSGMOP00000016347
annotation not available
     
 0.832
ENSGMOP00000000802
Laminin, beta 1a.
     
 0.818
LAMA2
Laminin subunit alpha 2.
    
 0.804
ENSGMOP00000019533
Laminin, beta 2 (laminin S).
     
 0.798
ENSGMOP00000014989
annotation not available
     
 0.793
ENSGMOP00000000485
Laminin, gamma 3.
    
 0.744
ENSGMOP00000007049
annotation not available
    
 0.744
ENSGMOP00000011618
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
    
 0.741
ENSGMOP00000000537
Eukaryotic translation elongation factor 1 gamma.
    
 0.666
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.