STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001246Nascent polypeptide associated complex subunit alpha. (393 aa)    
Predicted Functional Partners:
ENSGMOP00000003830
Ribosomal protein L24.
   
   0.988
ENSGMOP00000005867
Ribosomal protein L18.
   
 
 0.988
RPL19
Ribosomal protein L19.
  
   0.987
RPL7A
Ribosomal protein L7a.
   
   0.987
ENSGMOP00000015972
Ribosomal protein L23a.
   
 
 0.986
ENSGMOP00000001035
Ribosomal protein L9.
  
   0.983
ENSGMOP00000008942
Ribosomal protein L4.
   
 
 0.982
ENSGMOP00000012357
Ribosomal protein L6.
   
   0.982
rpl18a
Ribosomal protein L18a.
   
 
 0.982
ENSGMOP00000002317
Ribosomal protein L30.
   
   0.980
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.