STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001302Interferon stimulated exonuclease gene. (219 aa)    
Predicted Functional Partners:
ENSGMOP00000016253
poly(A) specific ribonuclease subunit PAN3.
    
 0.894
pcna
Proliferating cell nuclear antigen.
  
 0.890
ENSGMOP00000019637
WD repeat domain 18.
  
  0.853
ENSGMOP00000006762
Small fragment nuclease.
  
 0.809
ENSGMOP00000003770
Ribosomal protein L7-like 1.
   
 0.792
ENSGMOP00000005804
Ribosomal protein L7.
   
 0.792
ENSGMOP00000006145
NIP7 nucleolar pre-rRNA processing protein.
   
   0.772
ENSGMOP00000011364
annotation not available
  
 
 0.769
ENSGMOP00000019129
DEAD (Asp-Glu-Ala-Asp) box polypeptide 55.
  
 0.759
ENSGMOP00000003643
Peter pan homolog.
   
   0.753
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.