STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001345annotation not available (247 aa)    
Predicted Functional Partners:
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.831
ENSGMOP00000013181
Myb-like, SWIRM and MPN domains 1.
   
 0.678
ENSGMOP00000007216
Splicing factor 3b, subunit 1.
   
 0.675
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.663
ENSGMOP00000020046
Nuclear cap binding protein subunit 2.
    
 0.661
ENSGMOP00000012989
Splicing factor 3b, subunit 2.
   
 0.660
ENSGMOP00000017496
Small nuclear ribonucleoprotein polypeptide E.
   
 0.658
ENSGMOP00000002653
Splicing factor 3b, subunit 4.
    
 0.649
ENSGMOP00000008279
Small nuclear ribonucleoprotein polypeptide F.
   
 0.647
ENSGMOP00000008713
Splicing factor 3b, subunit 3.
    
 0.644
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.