STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001382TUB bipartite transcription factor. (489 aa)    
Predicted Functional Partners:
ENSGMOP00000015592
Tetratricopeptide repeat domain 21B.
    
 0.808
ENSGMOP00000014755
annotation not available
    
 0.805
ENSGMOP00000014786
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.805
ENSGMOP00000000967
WD repeat domain 19.
    
 0.802
ENSGMOP00000004388
WD repeat domain 35.
    
 0.781
ENSGMOP00000003945
G protein-coupled receptor 161.
     
 0.676
IFT43
Intraflagellar transport 43.
    
 
 0.551
ENSGMOP00000004849
Ankyrin repeat domain 54.
    
   0.519
ENSGMOP00000010397
annotation not available
   
 0.468
ENSGMOP00000012262
TBC1 domain family, member 5.
    
 
 0.446
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.