STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001513Histone deacetylase 11. (334 aa)    
Predicted Functional Partners:
ENSGMOP00000018683
annotation not available
    
 0.924
ENSGMOP00000020159
Translocase of outer mitochondrial membrane 20.
    
 0.924
LOC115559527
Core histone macro-H2A.2.
   
 0.903
LOC115546069
Histone H2A.V.
   
 0.825
H2AZ1
H2A.Z variant histone 1.
   
 0.825
ENSGMOP00000009117
SIN3 transcription regulator family member Ab.
   
 0.784
ENSGMOP00000009882
SIN3 transcription regulator family member Aa.
   
 0.784
ENSGMOP00000014618
SIN3 transcription regulator family member B.
   
 0.784
ENSGMOP00000007440
Nuclear receptor corepressor 2.
    
 0.779
ENSGMOP00000011443
annotation not available
    
 0.779
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.