STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001560CBFA2/RUNX1 partner transcriptional co-repressor 3. (589 aa)    
Predicted Functional Partners:
ENSGMOP00000020161
Spi-1 proto-oncogene b.
    
 0.876
ENSGMOP00000017734
Cytochrome b5 reductase 4.
  
 0.858
ENSGMOP00000002141
annotation not available
    
 0.846
ENSGMOP00000021104
Acetylserotonin O-methyltransferase-like.
     
 0.846
ENSGMOP00000011618
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
    
  0.841
ENSGMOP00000014159
alanyl-tRNA synthetase domain containing 1.
  
 
  0.840
ENSGMOP00000014233
Mediator complex subunit 17.
    
 0.836
ENSGMOP00000014275
Mediator complex subunit 10.
    
 0.836
ENSGMOP00000013827
Mediator complex subunit 14.
    
 0.835
ENSGMOP00000014994
Mediator complex subunit 6.
    
 0.831
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.