STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001578annotation not available (765 aa)    
Predicted Functional Partners:
ENSGMOP00000007918
Transcription factor 7 like 2.
    
 0.857
ENSGMOP00000018635
Lymphoid enhancer-binding factor 1.
    
 0.857
ENSGMOP00000006737
annotation not available
    
 0.806
ENSGMOP00000019406
Transcription factor 7 like 1a.
    
 0.806
HDAC2
Histone deacetylase 2.
    
 0.787
ENSGMOP00000016246
annotation not available
    
 0.741
ENSGMOP00000003469
annotation not available
    
 0.711
HDAC1
Histone deacetylase 1.
    
 0.711
ENSGMOP00000001496
Histone deacetylase 3.
    
 0.665
ENSGMOP00000020442
Histone deacetylase 8.
    
 0.665
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.