STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001622Cadherin 15, type 1, M-cadherin (myotubule). (760 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.848
ARVCF
ARVCF delta catenin family member.
    
 0.762
ENSGMOP00000021021
Catenin (cadherin-associated protein), delta 1.
    
 0.762
CTNND1
Catenin delta 1.
    
 0.762
ENSGMOP00000020855
annotation not available
   
 0.688
ENSGMOP00000020989
Junction plakoglobin a.
   
 0.688
ENSGMOP00000018213
annotation not available
   
 0.668
ENSGMOP00000011064
Plakophilin 4.
    
 0.664
ENSGMOP00000012146
annotation not available
    
 0.664
ENSGMOP00000018354
Catenin (cadherin-associated protein), delta 2b.
    
 0.664
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.