STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001637Si:ch211-57i17.1. (321 aa)    
Predicted Functional Partners:
ENSGMOP00000014960
Short coiled-coil protein a.
   
 
 0.799
KIF5A
Kinesin family member 5A.
   
 
 0.473
KIF5C
Kinesin family member 5C.
   
 
 0.473
KIF5C-2
Kinesin family member 5C.
   
 
 0.473
ENSGMOP00000014975
Kinesin family member 5B, a.
   
 
 0.473
ENSGMOP00000015344
Kinesin family member 5A, a.
   
 
 0.473
ENSGMOP00000009191
annotation not available
   
 
 0.470
ENSGMOP00000002341
annotation not available
    
 
 0.468
ENSGMOP00000002468
Unc-119 homolog b (C. elegans).
   
  
 0.442
ENSGMOP00000011947
LY6/PLAUR domain containing 6.
   
 
 0.436
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.