STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001672Solute carrier family 4 member 1a (Diego blood group). (892 aa)    
Predicted Functional Partners:
ENSGMOP00000004641
Solute carrier family 26 member 10.
     
 0.666
ENSGMOP00000000227
Rh associated glycoprotein.
   
 
 0.637
aqp1
Aquaporin 1 (Colton blood group).
   
 
 0.581
ENSGMOP00000013080
Ankyrin 1, erythrocytic a.
    
 0.541
ENSGMOP00000018025
Ankyrin 1, erythrocytic b.
    
 0.541
ENSGMOP00000016873
annotation not available
   
 
 0.522
ENSGMOP00000002785
annotation not available
    
 0.521
ENSGMOP00000020040
Ankyrin 3a.
    
 0.521
ENSGMOP00000016838
Carbonic anhydrase.
   
 
 0.513
ENSGMOP00000020621
Rh blood group, D antigen.
   
 
 0.513
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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