STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001729Vacuolar protein sorting 45 homolog. (544 aa)    
Predicted Functional Partners:
ENSGMOP00000018373
Rabenosyn, RAB effector.
    
 0.996
ENSGMOP00000016395
Syntaxin 16.
    
 
 0.994
ENSGMOP00000009575
Vesicle transport through interaction with t-SNAREs 1A.
   
 
 0.961
ENSGMOP00000014976
annotation not available
    
 
 0.908
ENSGMOP00000020972
Syntaxin 10.
    
 
 0.908
vps18
VPS18 core subunit of CORVET and HOPS complexes.
    
 0.902
ENSGMOP00000006372
Mitochondrial tRNA translation optimization 1.
 
      0.900
ENSGMOP00000011207
ERGIC and golgi 3.
 
      0.900
ENSGMOP00000002510
Component of oligomeric golgi complex 6.
    
 0.890
ENSGMOP00000009562
annotation not available
   
 
 0.889
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.