STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001732Si:dkey-21e5.1. (1145 aa)    
Predicted Functional Partners:
ENSGMOP00000003145
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
    
 0.826
ENSGMOP00000003194
Si:ch211-38m6.7.
     
 0.811
LOC115548285
cAMP-dependent protein kinase catalytic subunit beta.
    
 0.649
ENSGMOP00000003885
Protein kinase X-linked.
    
 0.649
LOC115530003
cAMP-dependent protein kinase catalytic subunit alpha.
    
 0.649
ENSGMOP00000011484
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.
    
 0.649
prkacb
Protein kinase cAMP-activated catalytic subunit beta.
    
 0.649
ENSGMOP00000018629
annotation not available
    
 0.600
ENSGMOP00000019895
annotation not available
    
 0.600
ENSGMOP00000004309
Potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4.
     
 0.570
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.