STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001784annotation not available (1611 aa)    
Predicted Functional Partners:
nrp1
Neuropilin 1.
    
 0.853
ENSGMOP00000008910
Semaphorin 7A.
    
 0.740
ENSGMOP00000009360
Si:ch211-113g11.6.
    
 0.740
SEMA4D
Semaphorin 4D.
    
 0.702
ENSGMOP00000007283
annotation not available
    
 0.702
ENSGMOP00000013126
Semaphorin 4e.
    
 0.702
ENSGMOP00000020841
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E.
    
 0.702
ENSGMOP00000018073
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl.
    
 0.699
ENSGMOP00000010542
Ras homolog family member F.
    
 0.683
LOC115548847
Rho-related GTP-binding protein Rho6.
    
 0.649
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.