STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNH2Potassium voltage-gated channel subfamily H member 2. (775 aa)    
Predicted Functional Partners:
KCNE2
Potassium voltage-gated channel subfamily E regulatory subunit 2.
    
 0.591
ENSGMOP00000013922
Potassium voltage-gated channel, Isk-related family, member 4.
     
 0.549
RYR2
Ryanodine receptor 2.
      
 0.530
ENSGMOP00000017659
Calcium channel, voltage-dependent, L type, alpha 1C subunit.
    
 
 0.523
ENSGMOP00000013019
Wingless-type MMTV integration site family, member 11.
      
 0.422
ENSGMOP00000001584
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 a.
    
 0.414
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
    
 0.414
ENSGMOP00000008935
annotation not available
    
 0.414
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
    
 0.414
ENSGMOP00000012674
Potassium voltage-gated channel, shaker-related subfamily, beta member 1 b.
    
 0.414
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.