STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001836Glycogenin 1b. (307 aa)    
Predicted Functional Partners:
ENSGMOP00000003662
annotation not available
   
 0.968
ENSGMOP00000015560
Glycogen synthase 1 (muscle).
   
 0.968
ENSGMOP00000002343
Glucan (1,4-alpha-), branching enzyme 1b.
   
 0.965
ENSGMOP00000017985
Polymerase (DNA directed), delta 2, regulatory subunit.
   
 0.926
ENSGMOP00000015516
Polymerase (DNA directed), delta 1, catalytic subunit.
    
 0.925
ENSGMOP00000001540
annotation not available
    
 0.864
pcna
Proliferating cell nuclear antigen.
   
 0.842
ENSGMOP00000010404
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.
   
 0.819
ENSGMOP00000018861
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a.
   
 0.819
ENSGMOP00000000066
ALG2 alpha-1,3/1,6-mannosyltransferase.
   
 0.816
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.