STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fen1Flap structure-specific endonuclease 1. (380 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen.
  
 0.995
ENSGMOP00000015516
Polymerase (DNA directed), delta 1, catalytic subunit.
  
 0.988
ENSGMOP00000003984
Ligase I, DNA, ATP-dependent.
  
 0.983
ENSGMOP00000013757
MRE11 homolog A, double strand break repair nuclease.
  
 0.963
ENSGMOP00000017985
Polymerase (DNA directed), delta 2, regulatory subunit.
  
 0.960
ENSGMOP00000013285
annotation not available
   
 0.959
ENSGMOP00000006948
mutS homolog 2 (E. coli).
  
 0.948
ENSGMOP00000006400
Replication factor C (activator 1) 3.
   
 0.939
rfc4
Replication factor C subunit 4.
   
 0.936
ENSGMOP00000013726
Polymerase (DNA directed), alpha 1.
  
 0.935
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.