STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000001873annotation not available (342 aa)    
Predicted Functional Partners:
arl1
ADP ribosylation factor like GTPase 1.
    
 0.871
ENSGMOP00000009881
annotation not available
    
 0.860
ENSGMOP00000000345
Rac family small GTPase 3b.
   
 0.634
RAC1
Rac family small GTPase 1.
   
 0.634
ENSGMOP00000008270
Rac family small GTPase 2.
   
 0.634
ENSGMOP00000009517
Rac family small GTPase 1b.
   
 0.634
LOC115544443
ADP-ribosylation factor 6.
    
 0.631
ENSGMOP00000022051
ADP-ribosylation factor 6a.
    
 0.631
ENSGMOP00000007919
ADP-ribosylation factor-like 15a.
    
 0.574
ENSGMOP00000006529
annotation not available
   
 0.534
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.